@article{kennedy2021secret,
  title={Secret messaging with endogenous chemistry},
  author={Kennedy, Eamonn and Geiser, Joseph and Arcadia, Christopher E and Weber, Peter M and Rose, Christopher and Rubenstein, Brenda M and Rosenstein, Jacob K},
  journal={Scientific Reports},
  volume={11},
  number={1},
  pages={1--10},
  year={2021},
  publisher={Nature Publishing Group}
}

@inproceedings{arcadia2021cmos,
  title={{CMOS} electrochemical imaging arrays for the detection and classification of microorganisms},
  author={Arcadia, Christopher E and Hu, Kangping and Epstein, Slava and Wanunu, Meni and Adler, Aaron and Rosenstein, Jacob K},
  booktitle={2021 IEEE International Symposium on Circuits and Systems (ISCAS)},
  pages={1--5},
  year={2021},
  organization={IEEE}
}

@article{arcadia2021leveraging,
  title={Leveraging autocatalytic reactions for chemical domain image classification},
  author={Arcadia, Christopher E and Dombroski, Amanda and Oakley, Kady and Chen, Shui Ling and Tann, Hokchhay and Rose, Christopher and Kim, Eunsuk and Reda, Sherief and Rubenstein, Brenda M and Rosenstein, Jacob K},
  journal={Chemical Science},
  year={2021},
  publisher={Royal Society of Chemistry}
}

@article{hu2021large,
  title={A Large-Scale Multimodal {CMOS} Biosensor Array With 131,072 Pixels and Code-Division Multiplexed Readout},
  author={Hu, Kangping and Arcadia, Christopher E and Rosenstein, Jacob K},
  journal={IEEE Solid-State Circuits Letters},
  volume={4},
  pages={48--51},
  year={2021},
  publisher={IEEE}
}

@article{shakya2020high,
  title={High-Dimensional Time Series Feature Extraction for Low-Cost Machine Olfaction},
  author={Shakya, Pratistha and Kennedy, Eamonn and Rose, Christopher and Rosenstein, Jacob K},
  journal={IEEE Sensors Journal},
  year={2020},
  publisher={IEEE}
}

@inproceedings{dai2020segmented,
  title={A Segmented SAR/SS ADC with Digital Error Correction and Programmable Resolution for Column-Parallel Sensor Arrays},
  author={Dai, Shanshan and Hu, Kangping and Rosenstein, Jacob K},
  booktitle={2020 IEEE International Symposium on Circuits and Systems (ISCAS)},
  pages={1--5},
  year={2020},
  organization={IEEE}
}

@article{arcadia2020multicomponent,
  title={Multicomponent molecular memory},
  author={Arcadia, Christopher E. and Kennedy, Eamonn and Geiser, Joseph and Dombroski, Amanda and Oakley, Kady  and Chen, Shui-Ling and Sprague, Leonard and Ozmen, Mustafa and Sello, Jason and Weber, Peter M. and Reda, Sherief and Rose, Christopher and Kim, Eunsuk and Rubenstein, Brenda M. and Rosenstein, Jacob K.},
  journal={Nature communications},
  volume={11},
  number={691},
  year={2020},
  doi={10.1038/s41467-020-14455-1},
  publisher={Nature Publishing Group}
}

@inproceedings{hu2019dielectric,
  title={High Frequency Dielectric Spectroscopy Array with Code Division Multiplexing for Biological Imaging},
  author={Hu, Kangping and Kennedy, Eamonn and Rosenstein, Jacob K},
  booktitle={2019 IEEE Biomedical Circuits and Systems Conference (BioCAS)},
  pages={1--4},
  year={2019},
  organization={IEEE}
}

@inproceedings{hu2019isfet,
  title={Low Noise CMOS ISFETs Using In-Pixel Chopping},
  author={Hu, Kangping and Lian, Xiaoyu and Dai, Shanshan and Rosenstein, Jacob K},
  booktitle={2019 IEEE Biomedical Circuits and Systems Conference (BioCAS)},
  pages={1--4},
  year={2019},
  organization={IEEE}
}

@article{kennedy2019metabolome,
    author = {Kennedy, Eamonn AND Arcadia, Christopher E. AND Geiser, Joseph AND Weber, Peter M. AND Rose, Christopher AND Rubenstein, Brenda M. AND Rosenstein, Jacob K.},
    journal = {PLOS ONE},
    publisher = {Public Library of Science},
    title = {Encoding information in synthetic metabolomes},
    year = {2019},
    month = {07},
    volume = {14},
    url = {https://doi.org/10.1371/journal.pone.0217364},
    pages = {1-12},
    number = {7},
    doi = {10.1371/journal.pone.0217364}
}

@article{rosenstein2020principles,
  title={Principles of information storage in small-molecule mixtures},
  author={Rosenstein, Jacob K and Rose, Christopher and Reda, Sherief and Weber, Peter M and Kim, Eunsuk and Sello, Jason and Geiser, Joseph and Kennedy, Eamonn and Arcadia, Christopher and Dombroski, Amanda and others},
  journal={IEEE transactions on nanobioscience},
  volume={19},
  number={3},
  pages={378--384},
  year={2020},
  publisher={IEEE}
}

@article{ozmen2018TMBMC,
  title={High Speed Chemical Vapor Communication Using Photoionization Detectors in Turbulent Flow},
  author={Ozmen, Mustafa and Kennedy, Eamonn and Rose, Jacob and Shakya, Pratistha and Rosenstein, Jacob K and Rose, Christopher},
  journal={IEEE Transactions on Molecular, Biological and Multi-Scale Communications},
  volume={4},
  number={3},
  pages={160--170},
  year={2018},
  publisher={IEEE}
}

@inproceedings{ozmen2018GLOBECOM,
  title={High Speed Chemical Vapor Communication Using Photoionization Detectors},
  author={Ozmen, Mustafa and Kennedy, Eamonn and Rose, Jacob and Shakya, Pratistha and Rosenstein, Jacob K and Rose, Christopher},
  booktitle={2018 IEEE Global Communications Conference (GLOBECOM)},
  pages={1--6},
  year={2018},
  organization={IEEE}
}

@inproceedings{webster2018trufflebot,
  title={TruffleBot: Low-Cost Multi-Parametric Machine Olfaction},
  author={Webster, Jason and Shakya, Pratistha and Kennedy, Eamonn and Caplan, Michael and Rose, Christopoher and Rosenstein, Jacob K},
  booktitle={2018 IEEE Biomedical Circuits and Systems Conference (BioCAS)},
  pages={1--4},
  year={2018},
  organization={IEEE}
}

@inproceedings{arcadia2018parallelized,
  title={Parallelized Linear Classification with Volumetric Chemical Perceptrons},
  author={Arcadia, Christopher E and Tann, Hokchhay and Dombroski, Amanda and Ferguson, Kady and Chen, Shui Ling and Kim, Eunsuk and Rose, Christopher and Rubenstein, Brenda M and Reda, Sherief and Rosenstein, Jacob K},
  booktitle={2018 IEEE International Conference on Rebooting Computing (ICRC)},
  pages={1--9},
  year={2018},
  organization={IEEE}
}

@article{perera2018probing,
  title={Probing the nucleation, growth, and evolution of hydrogen nanobubbles at single catalytic sites},
  author={Perera, Rukshan T and Arcadia, Christopher E and Rosenstein, Jacob K},
  journal={Electrochimica Acta},
  volume={283},
  pages={1773--1778},
  year={2018},
  publisher={Elsevier}
}

@article{kennedy2018spatiotemporal,
  title={Spatiotemporal information preservation in turbulent vapor plumes},
  author={Kennedy, Eamonn and Shakya, Pratistha and Ozmen, Mustafa and Rose, Christopher and Rosenstein, Jacob K},
  journal={Applied Physics Letters},
  volume={112},
  number={26},
  pages={264103},
  year={2018},
  publisher={AIP Publishing}
}

@article{fleischer2018jfet,
  title={CMOS-Integrated Low-Noise Junction Field-Effect Transistors for Bioelectronic Applications},
  author={Fleischer, Daniel A and Shekar, Siddharth and Dai, Shanshan and Field, Ryan M and Lary, Jenifer and Rosenstein, Jacob K and Shepard, Kenneth L},
  journal={IEEE Electron Device Letters},
  volume={39},
  number={7},
  pages={931--934},
  year={2018},
  publisher={IEEE}
}

@article{shakya2018correlated,
  title={Correlated transmission and detection of concentration-modulated chemical vapor plumes},
  author={Shakya, Pratistha and Kennedy, Eamonn and Rose, Christopher and Rosenstein, Jacob K},
  journal={IEEE Sensors Journal},
  volume={18},
  number={16},
  pages={6504--6509},
  year={2018},
  publisher={IEEE}
}

@inproceedings{rose2018computing,
  title={Computing with chemicals: Perceptrons using mixtures of small molecules},
  author={Rose, Christopher and Reda, Sherief and Rubenstein, Brenda and Rosenstein, Jacob},
  booktitle={2018 IEEE International Symposium on Information Theory (ISIT)},
  pages={2236--2240},
  year={2018},
  organization={IEEE}
}

@article{perera2018quasi,
  title={Quasi-reference electrodes in confined electrochemical cells can result in in situ production of metallic nanoparticles},
  author={Perera, Rukshan T and Rosenstein, Jacob K},
  journal={Scientific reports},
  volume={8},
  number={1},
  pages={1965},
  year={2018},
  publisher={Nature Publishing Group}
}

@article{arcadia2017situ,
  title={In situ nanopore fabrication and single-molecule sensing with microscale liquid contacts},
  author={Arcadia, Christopher E and Reyes, Carlos C and Rosenstein, Jacob K},
  journal={ACS nano},
  volume={11},
  number={5},
  pages={4907--4915},
  year={2017},
  publisher={ACS Publications}
}

@inproceedings{jimenez2017microwatt,
  title={A microwatt front end and asynchronous ADC for sparse biopotential acquisition},
  author={Jimenez, Jaime and Dai, Shanshan and Rosenstein, Jacob K},
  booktitle={2017 IEEE 60th International Midwest Symposium on Circuits and Systems (MWSCAS)},
  pages={503--506},
  year={2017},
  organization={IEEE}
}

@article{dai2017currentclamp,
  title={A 15-V bidirectional current clamp circuit for integrated patch clamp electrophysiology},
  author={Dai, Shanshan and Rosenstein, Jacob K},
  journal={IEEE Transactions on Circuits and Systems II: Express Briefs},
  volume={64},
  number={11},
  pages={1287--1291},
  year={2017},
  publisher={IEEE}
}

@article{dai2016frontend,
  title={A 155-dB dynamic range current measurement front end for electrochemical biosensing},
  author={Dai, Shanshan and Perera, Rukshan T and Yang, Zi and Rosenstein, Jacob K},
  journal={IEEE transactions on biomedical circuits and systems},
  volume={10},
  number={5},
  pages={935--944},
  year={2016},
  publisher={IEEE}
}

@article{shekar2016measurement,
  title={Measurement of DNA translocation dynamics in a solid-state nanopore at 100 ns temporal resolution},
  author={Shekar, Siddharth and Niedzwiecki, David J and Chien, Chen-Chi and Ong, Peijie and Fleischer, Daniel A and Lin, Jianxun and Rosenstein, Jacob K and Drndić, Marija and Shepard, Kenneth L},
  journal={Nano letters},
  volume={16},
  number={7},
  pages={4483--4489},
  year={2016},
  publisher={ACS Publications}
}

@inproceedings{dai2015dual,
  title={A dual-mode low-noise nanosensor front-end with 155-dB dynamic range},
  author={Dai, Shanshan and Rosenstein, Jacob K},
  booktitle={2015 IEEE Biomedical Circuits and Systems Conference (BioCAS)},
  pages={1--4},
  year={2015},
  organization={IEEE}
}

@article{roseman2015hybrid,
  title={Hybrid integrated biological--solid-state system powered with adenosine triphosphate},
  author={Roseman, Jared M and Lin, Jianxun and Ramakrishnan, Siddharth and Rosenstein, Jacob K and Shepard, Kenneth L},
  journal={Nature communications},
  volume={6},
  pages={10070},
  year={2015},
  publisher={Nature Publishing Group}
}

@article{emmett2015statistical,
  title={Statistical Inference for Nanopore Sequencing with a Biased Random Walk Model},
  author={Emmett, Kevin J and Rosenstein, Jacob K and van de Meent, Jan-Willem and Shepard, Ken L and Wiggins, Chris H},
  journal={Biophysical journal},
  volume={108},
  number={8},
  pages={1852--1855},
  year={2015},
  publisher={Elsevier}
}

@article{rosenstein2015single,
  title={Single-molecule bioelectronics},
  author={Rosenstein, Jacob K and Lemay, Serge G and Shepard, Kenneth L},
  journal={Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology},
  volume={7},
  number={4},
  pages={475--493},
  year={2015},
  publisher={Wiley Online Library}
}

@inproceedings{bellin2014interfacing,
  title={Interfacing CMOS electronics to biological systems: from single molecules to cellular communities},
  author={Bellin, Daniel L and Warren, Steven B and Rosenstein, Jacob K and Shepard, Kenneth L},
  booktitle={2014 IEEE Biomedical Circuits and Systems Conference (BioCAS) Proceedings},
  pages={476--479},
  year={2014},
  organization={IEEE}
}

@article{bellin2014integrated,
  title={Integrated circuit-based electrochemical sensor for spatially resolved detection of redox-active metabolites in biofilms},
  author={Bellin, Daniel L and Sakhtah, Hassan and Rosenstein, Jacob K and Levine, Peter M and Thimot, Jordan and Emmett, Kevin and Dietrich, Lars EP and Shepard, Kenneth L},
  journal={Nature communications},
  volume={5},
  pages={3256},
  year={2014},
  publisher={Nature Publishing Group}
}

@article{larkin2014proteins,
  title={High-bandwidth protein analysis using solid-state nanopores},
  author={Larkin, Joseph and Henley, Robert Y and Muthukumar, Murugappan and Rosenstein, Jacob K and Wanunu, Meni},
  journal={Biophysical journal},
  volume={106},
  number={3},
  pages={696--704},
  year={2014},
  publisher={Elsevier}
}

@article{larkin2013hafnium,
  title={Slow DNA transport through nanopores in hafnium oxide membranes},
  author={Larkin, Joseph and Henley, Robert and Bell, David C and Cohen-Karni, Tzahi and Rosenstein, Jacob K and Wanunu, Meni},
  journal={Acs Nano},
  volume={7},
  number={11},
  pages={10121--10128},
  year={2013},
  publisher={ACS Publications}
}

@inproceedings{rosenstein2013temporal,
  title={Temporal resolution of nanopore sensor recordings},
  author={Rosenstein, Jacob K and Shepard, Kenneth L},
  booktitle={2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)},
  pages={4110--4113},
  year={2013},
  organization={IEEE}
}

@article{rosenstein2013ion,
  title={Single ion channel recordings with CMOS-anchored lipid membranes},
  author={Rosenstein, Jacob K and Ramakrishnan, Siddharth and Roseman, Jared and Shepard, Kenneth L},
  journal={Nano letters},
  volume={13},
  number={6},
  pages={2682--2686},
  year={2013},
  publisher={ACS Publications}
}

@article{venta2013differentiation,
  title={Differentiation of short, single-stranded DNA homopolymers in solid-state nanopores},
  author={Venta, Kimberly and Shemer, Gabriel and Puster, Matthew and Rodriguez-Manzo, Julio A and Balan, Adrian and Rosenstein, Jacob K and Shepard, Ken and Drndic, Marija},
  journal={ACS nano},
  volume={7},
  number={5},
  pages={4629--4636},
  year={2013},
  publisher={ACS Publications}
}

@article{rosenstein2012integratednanopore,
  title={Integrated nanopore sensing platform with sub-microsecond temporal resolution},
  author={Rosenstein, Jacob K and Wanunu, Meni and Merchant, Christopher A and Drndic, Marija and Shepard, Kenneth L},
  journal={Nature methods},
  volume={9},
  number={5},
  pages={487},
  year={2012},
  publisher={Nature Publishing Group}
}

@inproceedings{rosenstein2012iscas,
  title={High-throughput biology in the time domain: Improving temporal resolution of single-molecule sensors},
  author={Rosenstein, Jacob and Shepard, Kenneth L},
  booktitle={2012 IEEE International Symposium on Circuits and Systems},
  pages={2291--2294},
  year={2012},
  organization={IEEE}
}

@inproceedings{rosenstein2011cicc,
  title={Noise and bandwidth performance of single-molecule biosensors},
  author={Rosenstein, J and Sorgenfrei, Sebastian and Shepard, Kenneth L},
  booktitle={2011 IEEE Custom Integrated Circuits Conference (CICC)},
  pages={1--7},
  year={2011},
  organization={IEEE}
}

@inproceedings{rosenstein2011transducers,
  title={Nanopore DNA sensors in CMOS with on-chip low-noise preamplifiers},
  author={Rosenstein, J and Ray, V and Drndic, M and Shepard, KL},
  booktitle={2011 16th International Solid-State Sensors, Actuators and Microsystems Conference},
  pages={874--877},
  year={2011},
  organization={IEEE}
}

@inproceedings{rosenstein2011lissa,
  title={Solid-state nanopores integrated with low-noise preamplifiers for high-bandwidth DNA analysis},
  author={Rosenstein, Jacob and Ray, Vishva and Drndic, Marija and Shepard, Kenneth L},
  booktitle={2011 IEEE/NIH Life Science Systems and Applications Workshop (LiSSA)},
  pages={59--62},
  year={2011},
  organization={IEEE}
}